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* Borja Ayerdi, Manuel Graña | * Borja Ayerdi, Manuel Graña |
Revisión del 15:19 16 may 2016
Borja Ayerdi Vilches
Imagine the future, change the present
Personal Data
- E-mail: borja.ayerdi@ehu.es
- Address:
- Computational Intelligence Group
- Computer Science Faculty - Lab. 307
- University Of The Basque Country (UPV/EHU)
- Paseo Manuel Lardizabal 1 - CP: 20018 Donostia/San Sebastián (GIPUZKOA) - Spain
- Tfno.: (+34) 943.01.80.47
Studies
- PhD Thesis: Contributions to Ensemble Classifiers with Image Analysis Applications. Director: Prof. Manuel Graña Romay. (18/Dec/2015)
- Masters Degree in Computational Engineering and Intelligent Systems (2011/2012) - Universidad del País Vasco (UPV/EHU).
- Computer Science Engineer (2009/2011) - Universidad del País Vasco (UPV/EHU).
- Technical Engineering in Information Management (2006/2009) - Universidad del País Vasco (UPV/EHU).
Accreditations
- PhD assistant Lecturer (ANECA, The National Agency for Quality Assessment and Accreditation of Spain)
Research Areas
- Medical Image segmentation and registration.
- Machine Learning application to medical image processing.
- Extreme Learning Machines.
- Hyperspectral imaging.
- Social Networks.
- Big data.
- Active learning.
- Hybrid classification ensembles.
Working experience
- January 2012 - ongoing: Beca predoctoral / Predoctoral fellowship granted by Gobierno Vasco / Basque Government.
- September 2011 - December 2011: Personal Investigador Contratado / Hired researcher at Universidad del País Vasco (UPV/EHU), Computational Intelligence Group.
- Project: EVARTRAC CIRUGÍA GUIADA POR IMAGEN: APLICACIÓN A LA REPARACIÓN ENDOVASCULAR DE ANEURISMAS DE AORTA.
Teaching
- Computer Vision (UPV/EHU 2015/2016)
- Computer Vision (UPV/EHU 2014/2015)
- Machine Learning and Neural Networks (UPV/EHU 2013/2014)
Courses
- Vitoria-Gasteiz 2009 - (Intensive Programme) Network Security and 4n6
Intership
- 2013 - Machine Learning Group, Wrocław University of Technology, Poland with Prof. Michal Wozniak
Research projects participation
- Proyecto: Aprendizaje cooperativo inter e intragrupal en el submodulo de escructura y arquitectura de computadores.
- Entidad adjudicataria: UPV/EHU, Proyecto de Innovación Educativa 6719.
- Investigador principal: Jose Manuel Lopez Guede.
- Fechas: 2014 – 2015.
- Proyecto: Técnicas de inteligencia computacional en el proceso de imagen hiperespectral y aplicaciones.
- Entidad adjudicataria: Ministerio de Ciencia e Innovación del Gobierno Español, TIN2011-28753-C02-02.
- Investigador principal: Prof. Alicia d'Anjou.
- Fechas: 2011 – 2013.
Publications
2016
- J. David Nuñez-Gonzalez, Borja Ayerdi, Manuel Graña, Michał Wozniak
- "A New Heuristic for Influence Maximization in Social Networks"
- Logic journal of the IGPL
- JCR 2015 - 0.461
- Borja Ayerdi, Manuel Grana
- "Anticipative Hybrid Extreme Rotation Forest"
- ICCS 2016, San Diego, June 2016 [1]
2015
- Borja Ayerdi, Manuel Graña
- "Hyperspectral Image Analysis by Spectral-Spatial Processing and Anticipatively Tuned Hybrid Extreme Rotation Forest Classification"
- IEEE Transactions on Geoscience and Remote Sensing (TGARS)
- JCR 2014 - 3.514
- Ariadna Besga, Itxaso González-Ortega, Enrique Echeburúa, Alexandre Savio, Borja Ayerdi, Darya Chyzhyk, Jose LM Madrigal, Juan C. Leza, Manuel Graña, Ana González-Pinto
- "Discrimination between Alzheimer’s Disease and Late Onset Bipolar Disorder using multivariate analysis"
- Frontiers in Aging Neuroscience
- JCR 2014 - 4.000
- A Besga-Basterra, B Ayerdi, G Alcalde-Behold, A Manzano-Ramirez, P Lopetegui-Eraso, M Graña, A González-Pinto-Arrillaga
- "Risk factors for emergency department short time readmission in stratified population"
- Biomed Research International
- JCR 2014 - 1.579
- Borja Ayerdi, Oier Echaniz, Alexandre Savio, Manuel Graña
- “Automated segmentation of subcutaneous and visceral adipose tissues from MRI”
- InMed 2015
- Borja Ayerdi, Manuel Graña
- "Random Forest Active Learning for Detecting Blood Vessels in Angiography"
- CORES 2015
- Ariadna Besga-Basterra, Darya Chyzhyk, Itxaso González-Ortega, Alexandre Savio, Borja Ayerdi, Jon Echeveste, Manuel Graña, Ana González-Pinto
- "White matter anatomical correlates with biomarkers discriminating between Alzheimer’s Disease and Late Onset Bipolar Disorder by eigenanatomy on fractional anisotropy imaging"
- Current Alzheimer Research
- JCR 2014 - 3.889 (Q1 Clin Neurol, T1 Neurosciences)
- Borja Ayerdi, Manuel Graña
- "Hyperspectral Image Nonlinear Unmixing and Reconstruction by ELM Regression Ensemble"
- Neurocomputing
- JCR 2014 - 2.083 (Q1 CSAI) / [5-Year Impact Factor: 2.292]
2014
- Borja Ayerdi, Manuel Graña
- "Hyperspectral Image Nonlinear Unmixing by Ensemble ELM Regression"
- Jiuwen Cao et al. (Eds.): Proceedings of ELM-2014 Volume 2, Proceedings in Adaptation, Learning and Optimization1, pp. 289-297. Springer.
- Borja Ayerdi, Ion Marqués and Manuel Grana
- "Spatially regularized semisupervised Ensembles of Extreme Learning Machines for hyperspectral image segmentation"
- Neurocomputing
- JCR 2014 - 2.083 (Q1 CSAI) / [5-Year Impact Factor: 2.292]
- Borja Ayerdi, Manuel Grana
- "Hybrid Extreme Rotation Forest"
- Neural Networks
- JCR 2014 - 2.708 (Q1 CSAI) / [5-Year Impact Factor: 2.729]
- Pawel Ksieniewicz, Dariusz Jankowski, Borja Ayerdi, Konrad Jackowski, Michal Wozniak and Manuel Graña
- "A Novel Hyperspectral Segmentation Algorithm - Concept and Evaluation"
- Logic Journal of the IGPL
- JCR 2012 - 1.136 (Q1 MATHEMATICS, Q1 APPLIED MATHEMATICS, Q1 LOGIC) / [5-Year Impact Factor: 0.79]
2013
- Borja Ayerdi, Ion Marqués and Manuel Grana
- "Spectral-spatial semi-supervised hyperspectral image segmentation using Ensembles of Extreme Learning Machines"
- ELM 2013, Beijing, October 15-17, 2013.
- J. Maiora , G. García , B. Ayerdi , M. Graña , M. De Blas
- "Active Learning enhanced with Expert Knowledge for Computed Tomography Image Segmentation"
- InMed 2013, Greece, 17-19 July, 2013.
- Borja Ayerdi, Josu Maiora, Manuel Graña
- "Aplications of Hybrid Extreme Rotation Forests for Image Segmentation"
- Journal of Hybrid Intelligent Systems
- Borja Ayerdi, Josu Maiora, Manuel Graña
- "Enhancing Active Learning Computed Tomography Image Segmentation with Domain Knowledge"
- HAIS 2013, Salamanca, 11-13 September, 2013.
- Borja Ayerdi, Alexandre Savio, Manuel Graña
- "Meta-ensembles of classifiers for Alzheimer's disease detection using independent ROI features"
- J.M. Ferrandez et al. (Eds.): IWINAC 2013, Part II, LNCS 7931, pp. 122--130. Springer, Heidelberg (2013)
- Borja Ayerdi, Manuel Graña
- "On Spatial Regularization for Semisupervised Hyperspectral Image Segmentation Using Hybrid Extreme Rotation Forest"
- WHISPERS 2013, Gainesville, USA, 25-28 June, 2013.
- Darya Chyzhyk, Borja Ayerdi, Josu Maiora
- "Active Learning with Bootstrapped Dendritic Classifier applied to medical image segmentation"
- Pattern Recognition Letters
- JCR 2013 - 1.062 (T1, Q2 CSAI) / [5-Year Impact Factor: 1.466]
- Josu Maiora, Borja Ayerdi, Manuel Graña
- "Random Forest Active Learning for Computed Tomography Angiography Image Segmentation"
- Neurocomputing
- JCR 2013 - 2.005 (Q1 CSAI) / [5-Year Impact Factor: 2.102]
2012
- Borja Ayerdi Vilches, Manuel Graña
- "Hybrid Extreme Rotation Forest".
- ELM 2012, Singapore, 11-13 December, 2012.
- Borja Ayerdi, Josu Maiora, Manuel Graña
- "Active learning of Hybrid Extreme Rotation Forests for CTA image segmentation".
- Hybrid Intelligent Systems (HIS), 2012 12th International Conference on (pp. 543-548). IEEE.
2010
- Ekaitz Zulueta Guerrero, Naiara Telleria Garay, Jose Manuel Lopez-Guede, Borja Ayerdi Vilches, Eider Egilegor Iragorri, David Lecumberri Castaños, Ana Belén de la Hoz Rastrollo and Carlos Pertusa Peña
- "Prediction of Bladder Cancer Recurrences Using Artificial Neural Networks"
- Lecture Notes in Computer Science, 2010, Volume 6076, Hybrid Artificial Intelligence Systems, Pages 492-499.
Conferences
- PyData 2014, Berlin ,25-27 July 2014.
- Europython 2014, Berlin ,21-27 July 2014.
- ELM 2013, Beijing, October 15-17, 2013.
- HAIS 2013, Salamanca, 11-13 September, 2013.
- WHISPERS 2013, Gainesville, USA, 25-28 June, 2013.
- IWINAC 2013, Mallorca, 10-14 June, 2013.
- FIA 2013, Dublin, 8-10 May, 2013.
- ELM 2012, Singapore, 11-13 December 2012.
- HIS 2012, Pune (India), 04-07 December 2012.
Reviewer
- KES 2012
- Pattern Recognition Letters
- Neurocomputing
- IEEE Journal of Selected Topics in Applied Earth Observations and Remote Sensing (JSTARS)
- Pattern Analysis and Applications
- InMed 2014
Organizer
- Local organizing committee member of Europython 2015 (Europython 2015)
- Local organizing committee member of Python San Sebastian 2014 (Pyss14)
- Local organizing committee member of the KES International Conference on Innovation in Medicine and Healthcare - (INMED 2014) 7, 8 & 9 July 2014, San Sebastian, Spain.
- Local organizing committee member of the 16th International Conference on Knowledge-Based and Intelligent Information & Engineering Systems – (KES 2012) 10, 11 & 12 September 2012, San Sebastian, Spain.
Other activities
- Treasurer and board member of the non-profit Python San Sebastian society (ACPySS)
- Treasurer and board member of the non-profit Euskopython society
- Treasurer and board member of the non-profit Europython society (EPS)
Awards
- Alexandre Savio, Borja Ayerdi y Manuel Graña: XIII Premio Manuel Laborde Werlinden, 2013 [2][3][4][5][6]
Semana de la ciencia
- XI Semana de la Ciencia 2011 (Diario Vasco)
- XII Semana de la Ciencia 2012
Software
- GIC Source Code
- Hybrid Extreme Rotation Forest (HERF) basic code
- Basic ELM code example
- Adaptative Extreme Rotation Forest (AdaHERF) python code
- Rotation Forest python code
- Unmixing matlab code
Datasets
General Datasets
- The Berkeley Segmentation Dataset and Benchmark
- Hyperspectral Remote Sensing Images (Salinas A, Salinas C, Indian Pines, Pavia University)
- UCI Machine Learning Repository
- Post-processed datasets by Alex Savio.
Hyperspectral Datasets
- Hyperspectral Remote Sensing Scenes
- Our own dataset!
- Foster Hyperspectral Images
- FOI HyperSpectral Images
- Spectir Hyperspectral Images
- Bristol Hyperspecrtal Images
- SourceForge repository
- SourceForge Hyperspectral repository
Medical Datasets
- OASIS
- INDI - 1000 Functional Connectomes Project
- ADNI
- BrainMap
- Fractional Anisotropy Database
- MIDAS
- ABIDE
- COBRE-Schizophrenia
Target journals
- IEEE Transactions on Fuzzy Systems (IF 5.484)
- IEEE Transactions on Pattern Analysis and Machine Intelligence (IF 4.795)
- Knowledge-Based Systems (IF 4.104)
- Information Sciences (IF 3.643)
- IEEE Transactions on Geoscience and Remote Sensing (IF 3.467)
- IEEE Journal of Selected Topics in Applied Earth Observations and Remote Sensing (IF 2.874))
- Neural Processing Letters (IF 1.240)
Utilities
- Intro 08/09/2014
- JCR
- Web of Knowledge
- Gestión de empleados UPV/EHU
- Gestión de aulas virtuales
- MOODLE
- GAUR
- Eduroam UPV/EHU
- VPN UPV/EHU
- My github
- My LinkedIn
- My Google Scholar
- Brain Cloud Computing (BCC)
- BCIG
- Gitlab
- Beamer appearance cheat sheet