Usuario:Alexsavio

Alexandre Manhaes Savio

alexandre.manhaes__at__ehu.es

Education

• Engineer in Computer Science (October 2006) - University of the Basque Country

• PhD Student at the Computational Intelligence Group of the Computer Science and Artificial Intelligence department

Courses

• 7th-11th July, 2008 - AERFAI Summer School - PRMA'08 - Pattern Recognition for Motion Analysis in the Computer Vision Center of the Universidad Autónoma de Barcelona.

Research Areas

• MRI medical images segmentation and registration for brain functional localization
• Gesture recognition systems

Research Questions

• How could I apply a Random Markov Field method to make a brain image registration? Isn't it related to Mutual Information?
• Would that be useful or better than the other existing methods?
• How does the fluid model non-rigid registration work?

Pending Tasks

• Preparar libro con las transparencias de las JIC'08.
• Learn to use 3DSlicer, FSL and SPM for registration.
• Creating plugin for 3DSlicer with groupwise registration method

Deadlines de congresos y trabajos pendientes

• SPIE Medical Imaging

Due Dates for Abstract Submission: 28 July 2008. Submit Your Manuscript: 12 January 2009.

• BIOSTEC 2009

Regular Paper Submission: October 17, 2008

• MICCAI 2009

Submission of full papers: 8 March 2009. Papers for MICCAI 2009 must be submitted in LNCS style, prepared for double-blind review, and may be up to 8 pages, including all references, tables and figures.

Work diary (meetings with directors)

2008

• 29/05 - Presentation of Jean-Luc and Charlotte about the OASIS presentation paper.
• 30/05 (15:00 - 17:00) - Discusión de artículo de Ardenakia

Current readings:

• Medical Image Registration - by Joseph V. Hajnal (Editor), Derek L.G. Hill (Editor), David J. Hawkes (Editor)

• Splines - A perfect Fit for Signal and Image Processing

• Quantitative comparison of algorithms next term for previous terminter-subject registration of 3D volumetric brain MRI scans - Babak A. Ardekania, Stephen Guckemusa, Alvin Bachmana, Matthew J. Hoptmanb, Michelle Wojtaszeka and Jay Nierenberga

• Nonrigid registration of brain MRI using NURBS - Jianzhe Wang and Tianzi Jian

• Contour Fitting Using an Adaptive Spline Model (1995) - Daniel Rueckert, Peter Burger

• More reading information in my groupware article Artículos Image Registration

Congresos y revistas objetivo:

• SPIE Medical Imaging - Next on 7 - 12 February 2009 - Orlando, Florida, USA:

• Computer Assisted Radiology and Surgery - Next on June 25 - 28, 2008 - Barcelona, Spain

• Medical Image Analysis

• FSL VBM How to

• MICCAI Society

• Insight Journal

Direcciones web de interés:

• Página de instalación de FSL en Debian

• CBU Imaging Wiki

• Insight Journal

• Kitware Youtube Channel

How To...

• Install ITK from sources.

• Install python wrapper on building ITK from sources.

• Create a 3DSlicer Plugin

• Sync Tomboy Notes

• Install Cisco VPN client on Ubuntu 8.04

• Push references from JabRef to Lyx

Estado burocrático de la tesis

Director

Manuel Graña

primer año de cursos de doctorado

matriculado para el trabajo de investigación

Utilidades

¿Cómo instalar el cliente VPN de Cisco en Ubuntu 8.04.?

Nomenclatura de los planos de corte en los seres vivos

How to push references from JabRef to Lyx

Matrices de confusión y otros valores estadísticos

SPIE LaTEX manuscript templates and writing guidelines

NA-MIC Software Repository

Some useful hints to know about the PhD